Publications

The Institute communicates its scientific and educational information in a number of ways. One major outlet is peer-reviewed publications and reports.  Cary Institute staff regularly publish in the best-rated journals in their respective fields.

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J. J. Cole, D. L. Bade, D. Bastviken, M. L. Pace, and M. C. Van de Bogert, “Multiple approaches to estimating air-water gas exchange in small lakes”, Limnol. Oceanogr. Methods, vol. 8, p. 285-293, 2010.
J. J. Cole and M. L. Pace, “Why measure bacterial production? [reply to comment by Jahnke and Craven]”, Limnol. Oceanogr., vol. 40, p. 441-444, 1995.
J. J. Cole, S. E. G. Findlay, and M. L. Pace, “Bacterial production in fresh and saltwater ecosystems: a cross-system overview”, Mar. Ecol. Prog. Ser., vol. 43, p. 1-10, 1988.
J. J. Cole, N. F. Caraco, and B. L. Peierls, “Can phytoplankton maintain a positive carbon balance in a turbid, freshwater, tidal estuary?”, Limnol. Oceanogr., vol. 37, p. 1608-1617, 1992.
J. J. Cole, “Decomposition”, in G. E. Likens (ed.). An Ecosystem Approach to Aquatic Ecology: Mirror Lake and Its Environment, 1985, p. 302-310.
J. J. Cole, N. F. Caraco, and B. L. Peierls, “Phytoplankton primary production in the tidal, freshwater Hudson River, New York (USA)”, Verh. Int. Ver. Limnol., vol. 24, p. 1715-1719, 1991.
J. J. Cole, “Microbial carbon cycling in pelagic ecosystems: microbial methods for ecosystem scientists”, in O. E. Sala, R. B. Jackson, H. A. Mooney, and R. W. Howarth (eds.). Methods in Ecosystem Science, 2000, p. 138-150.
J. J. Cole and N. F. Caraco, “Primary production and its regulation in the tidal-freshwater Hudson River”, in J. S. Levinton and J. R. Waldman (eds.). The Hudson River Estuary, 2006, p. 107-120.
J. J. Cole, N. F. Caraco, D. L. Strayer, C. A. Ochs, and S. S. Nolan, “A detailed carbon budget as an ecosystem-level calibration of bacterial respiration in an oligotrophic lake during mid-summer”, Limnol. Oceanogr., vol. 34, p. 286-296, 1989.
J. J. Cole, N. F. Caraco, G. W. Kling, and T. K. Kratz, “Carbon dioxide supersaturation in the surface waters of lakes”, Science, vol. 265, p. 1568-1570, 1994.
J. J. Cole, et al., “Plumbing the global carbon cycle: Integrating inland waters into the terrestrial carbon budget”, Ecosystems, vol. 10, p. 171-184, 2007.
J. J. Cole, B. L. Peierls, N. F. Caraco, and M. L. Pace, “Nitrogen loading of rivers as a human-driven process”, in M. J. McDonnell and S. T. A. Pickett (eds.). Humans as Components of Ecosystems: The Ecology of Subtle Human Effects and Populated Areas, 1993, p. 141-157.
J. J. Cole, “Production in pristine lakes”, Nature, vol. 460, p. 463-464, 2009.
J. J. Cole and M. L. Pace, “Bacterial secondary production in oxic and anoxic freshwaters”, Limnol. Oceanogr., vol. 40, p. 1019-1027, 1995.
J. J. Cole, S. Honjo, and N. F. Caraco, “Seasonal variation in the flux of algal pigments to a deep-water site in the Panama Basin”, Hydrobiologia, vol. 122, p. 193-197, 1985.
J. J. Cole and N. F. Caraco, “Carbon in catchments: connecting terrestrial carbon losses with aquatic metabolism”, Mar. Freshwat. Res., vol. 52, p. 101-110, 2001.
J. J. Cole, G. E. Likens, and J. E. Hobbie, “Decomposition of planktonic algae in an oligotrophic lake”, Oikos, vol. 42, p. 257-266, 1984.
Comparative Analyses of Ecosystems: Patterns, Mechanisms and Theories. 1991, p. 375.
J. J. Cole and C. Lee, “Rapid microbial metabolism of betaalanine, a non-protein amino acid, in brackish and oceanic waters”, Biogeochemistry, vol. 2, p. 299-312, 1986.
J. J. Cole and O. Kinne, Freshwater ecosystems and the carbon cycle. Oldendorf/Luhe: , 2013, p. 146.
J. J. Cole, J. M. Lane, R. Marino, and R. W. Howarth, “Molybdenum assimilation by cyanobacteria and phytoplankton in freshwater and salt water”, Limnol. Oceanogr., vol. 38, p. 25-35, 1993.
J. J. Cole, N. F. Caraco, and G. E. Likens, “Short-range atmospheric transport: a significant source of phosphorus to an oligotrophic lake”, Limnol. Oceanogr., vol. 35, p. 1230-1237, 1990.
J. J. Cole, “Freshwater in flux”, Nature Geoscience, vol. 6, no. 1, p. 13 - 14, 2012.
J. J. Cole, S. Honjo, and J. Erez, “Particulate flux and benthic decomposition of organic matter at a deep-water site in the Panama Basin”, Nature, vol. 327, p. 703-704, 1987.
J. J. Cole, S. R. Carpenter, M. L. Pace, M. C. Van de Bogert, J. F. Kitchell, and J. R. Hodgson, “Differential support of lake food webs by three types of terrestrial organic carbon”, Ecol. Lett., vol. 9, p. 558-568, 2006.

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