Research Publications

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Does fine scale spatiotemporal variation in seed rain translate into plant population structure?
Gratzer, G, MB Pesendorfer, F Sachser, L Wachtveitl, U Nopp-Mayr, J Szwagrzyk, and Charles D. Canham. (2026) 2022. “Does Fine Scale Spatiotemporal Variation in Seed Rain Translate into Plant Population Structure?”. OIKOS 2022 (2). doi:10.1111/oik.08826.
Can interactive data visualizations promote waterfront best management practices?
Ward, NK, MG Sorice, MS Reynolds, Kathleen C. Weathers, WZ Weng, and Cayelan C. Carey. (2026) 2022. “Can Interactive Data Visualizations Promote Waterfront Best Management Practices?”. LAKE AND RESERVOIR MANAGEMENT 38 (1): 95-108,. doi:10.1080/10402381.2021.2021335.
The New Zealand mud snail (Potamopyrgus antipodarum): autecology and management of a global invader
Geist, JA, JL Mancuso, MM Morin, KP Bommarito, EN Bovee, D Wendell, B Burroughs, MR Luttenton, David L. Strayer, and SD Tiegs. (2026) 2022. “The New Zealand Mud Snail (Potamopyrgus Antipodarum): Autecology and Management of a Global Invader”. BIOLOGICAL INVASIONS 24 (4): 905-938,. doi:10.1007/s10530-021-02681-7.
Seasonal Partitioning of Rainfall in Second-Growth Evergreen Temperate Rainforests in Chiloe Island, Southern Chile
Frene, C, M Nunez-Avila, B Castro, and Juan J. Armesto. (2026) 2022. “Seasonal Partitioning of Rainfall in Second-Growth Evergreen Temperate Rainforests in Chiloe Island, Southern Chile”. FRONTIERS IN FORESTS AND GLOBAL CHANGE 4. doi:10.3389/ffgc.2021.781663.
Limitations to Propagule Dispersal Will Constrain Postfire Recovery of Plants and Fungi in Western Coniferous Forests
Gill, NS, MG Turner, CD Brown, SI Glassman, SL Haire, Winslow D. Hansen, ER Pansing, SB St Clair, and DF Tomback. 2022. “Limitations to Propagule Dispersal Will Constrain Postfire Recovery of Plants and Fungi in Western Coniferous Forests”. BIOSCIENCE. doi:10.1093/biosci/biab139.
The interactions among fire, logging, and climate change have sprung a landscape trap in Victoria's montane ash forests
Lindenmayer, DB, EJ Bowd, C Taylor, and Gene E. Likens. 2022. “The Interactions Among Fire, Logging, and Climate Change Have Sprung a Landscape Trap in Victoria’s Montane Ash Forests”. PLANT ECOLOGY. doi:10.1007/s11258-021-01217-2.
Volatile and Dissolved Organic Carbon Sources Have Distinct Effects on Microbial Activity, Nitrogen Content, and Bacterial Communities in Soil
McBride, SG, ED Osburn, Jane M. Lucas, JS Simpson, T Brown, JE Barrett, and MS Strickland. 2022. “Volatile and Dissolved Organic Carbon Sources Have Distinct Effects on Microbial Activity, Nitrogen Content, and Bacterial Communities in Soil”. MICROBIAL ECOLOGY. doi:10.1007/s00248-022-01967-0.
An Exploratory Study on the Microbiome of Northern and Southern Populations of Ixodes scapularis Ticks Predicts Changes and Unique Bacterial Interactions
Kumar, D, LP Downs, A Adegoke, E Machtinger, Kelly M. Oggenfuss, Richard S. Ostfeld, M Embers, and S Karim. (2026) 2022. “An Exploratory Study on the Microbiome of Northern and Southern Populations of Ixodes Scapularis Ticks Predicts Changes and Unique Bacterial Interactions”. PATHOGENS 11 (2). doi:10.3390/pathogens11020130.
Dilution of Epidemic Potential of Environmentally Transmitted Infectious Diseases for Species with Partially Overlapping Habitats
Espira, LM, AF Brouwer, Barbara A. Han, J Foufopoulos, and JNS Eisenberg. 2022. “Dilution of Epidemic Potential of Environmentally Transmitted Infectious Diseases for Species With Partially Overlapping Habitats”. AMERICAN NATURALIST. doi:10.1086/717413.
Identifying factors that affect mountain lake sensitivity to atmospheric nitrogen deposition across multiple scales
Burpee, BT, JE Saros, L Nanus, J Baron, J Brahney, KR Christianson, T Ganz, et al. (2026) 2022. “Identifying Factors That Affect Mountain Lake Sensitivity to Atmospheric Nitrogen Deposition across Multiple Scales”. WATER RESEARCH 209. doi:10.1016/j.watres.2021.117883.
Mainstream Nature-Based Solutions for Urban Climate Resilience
Frantzeskaki, N, and Timon McPhearson. (2026) 2022. “Mainstream Nature-Based Solutions for Urban Climate Resilience”. BIOSCIENCE 72 (2): 113-115,. doi:10.1093/biosci/biab105.
Reducing adverse impacts of Amazon hydropower expansion
Flecker, AS, QR Shi, Rafael M. Almeida, H Angarita, JM Gomes-Selman, R Garcia-Villacorta, SA Sethi, et al. (2026) 2022. “Reducing Adverse Impacts of Amazon Hydropower Expansion”. SCIENCE 375 (6582): +, 753+. doi:10.1126/science.abj4017.
Principles for scientists working at the river science-policy interface
Thompson, RM, EJ Barbour, CJA Bradshaw, S Briggs, N Byron, M Grace, BT Hart, et al. 2022. “Principles for Scientists Working at the River Science-Policy Interface”. RIVER RESEARCH AND APPLICATIONS. doi:10.1002/rra.3951.
Computational thinking for using models of water flow in environmental systems: Intertwining three dimensions in a learning progression
Gunckel, KL, BA Covitt, Alan R. Berkowitz, Bess Caplan, and JC Moore. 2022. “Computational Thinking for Using Models of Water Flow in Environmental Systems: Intertwining Three Dimensions in a Learning Progression”. JOURNAL OF RESEARCH IN SCIENCE TEACHING. doi:10.1002/tea.21755.
A framework for research on recurrent acute disasters
Machlis, GE, MO Roman, and Steward T. A. Pickett. (2026) 2022. “A Framework for Research on Recurrent Acute Disasters”. SCIENCE ADVANCES 8 (10). doi:10.1126/sciadv.abk2458.
Evaluating the roles of microbial functional breadth and home-field advantage in leaf litter decomposition
Osburn, ED, PJ Hoch, Jane M. Lucas, SG McBride, and MS Strickland. 2022. “Evaluating the Roles of Microbial Functional Breadth and Home-Field Advantage in Leaf Litter Decomposition”. FUNCTIONAL ECOLOGY. doi:10.1111/1365-2435.14026.
Nitrogen cycling and urban afforestation success in New York City
Mejia, GA, Peter M. Groffman, AE Downey, Elizabeth M. Cook, S Sritrairat, R Karty, MI Palmer, and Timon McPhearson. 2022. “Nitrogen Cycling and Urban Afforestation Success in New York City”. ECOLOGICAL APPLICATIONS. doi:10.1002/eap.2535.
Taxonomic scale and community organization impact observed latitudinal gradients of parasite diversity
Preisser, WC, Adrian Castellanos, JM Kinsella, R Vargas, E Gonzalez, JA Fernandez, NO Dronen, AM Lawing, and JE Light. 2022. “Taxonomic Scale and Community Organization Impact Observed Latitudinal Gradients of Parasite Diversity”. JOURNAL OF BIOGEOGRAPHY. doi:10.1111/jbi.14322.
Five state factors control progressive stages of freshwater salinization syndrome
Kaushal, Sujay S., PM Mayer, Gene E. Likens, JE Reimer, CM Maas, MA Rippy, SB Grant, et al. 2022. “Five State Factors Control Progressive Stages of Freshwater Salinization Syndrome”. LIMNOLOGY AND OCEANOGRAPHY LETTERS. doi:10.1002/lol2.10248.
Foreword
Subbarao, GV, JC Lata, C Gubry-Rangin, P Nannipieri, and William H. Schlesinger. 2022. “Foreword”. BIOLOGY AND FERTILITY OF SOILS. doi:10.1007/s00374-022-01622-3.
What is green infrastructure? A study of definitions in US city planning
Grabowski, Zbigniew J., Timon McPhearson, Marissa Matsler, Peter M. Groffman, and Steward T. A. Pickett. 2022. “What Is Green Infrastructure? A Study of Definitions in US City Planning”. Frontiers in Ecology and the Environment. Wiley. doi:10.1002/fee.2445.
Effects of pH and Dissolved Silicate on Phosphate Mineral-Water Partitioning with Goethite
Sabur, MA, CT Parsons, Taylor Maavara, and P Van Cappellen. (2026) 2021. “Effects of PH and Dissolved Silicate on Phosphate Mineral-Water Partitioning With Goethite”. ACS EARTH AND SPACE CHEMISTRY 6 (1): 34-43,. doi:10.1021/acsearthspacechem.1c00197.
Magnitude and Uncertainty of Nitrous Oxide Emissions From North America Based on Bottom-Up and Top-Down Approaches: Informing Future Research and National Inventories
Xu, R, H Tian, N Pan, RL Thompson, JG Canadell, EA Davidson, C Nevison, et al. (2026) 2021. “Magnitude and Uncertainty of Nitrous Oxide Emissions From North America Based on Bottom-Up and Top-Down Approaches: Informing Future Research and National Inventories”. GEOPHYSICAL RESEARCH LETTERS 48 (23). doi:10.1029/2021GL095264.
Rivers as the largest source of mercury to coastal oceans worldwide
Liu, MD, QR Zhang, Taylor Maavara, SD Liu, XJ Wang, and PA Raymond. (2026) 2021. “Rivers As the Largest Source of Mercury to Coastal Oceans Worldwide”. NATURE GEOSCIENCE 14 (9): +, 672+. doi:10.1038/s41561-021-00793-2.
Does Photomineralization of Dissolved Organics Matter in Temperate Rivers?
Maavara, Taylor, L Logozzo, A Stubbins, K Aho, C Brinkerhoff, J Hosen, and P Raymond. (2026) 2021. “Does Photomineralization of Dissolved Organics Matter in Temperate Rivers?”. JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES 126 (7). doi:10.1029/2021JG006402.
Hysteresis Patterns of Watershed Nitrogen Retention and Loss Over the Past 50 years in United States Hydrological Basins
Newcomer, ME, NJ Bouskill, H Wainwright, Taylor Maavara, B Arora, ER Siirila-Woodburn, D Dwivedi, KH Williams, C Steefel, and SS Hubbard. (2026) 2021. “Hysteresis Patterns of Watershed Nitrogen Retention and Loss Over the Past 50 Years in United States Hydrological Basins”. GLOBAL BIOGEOCHEMICAL CYCLES 35 (4). doi:10.1029/2020GB006777.
Modeling geogenic and atmospheric nitrogen through the East River Watershed, Colorado Rocky Mountains
Maavara, Taylor, ER Siirila-Woodburn, F Maina, RM Maxwell, JE Sample, KD Chadwick, R Carroll, et al. (2026) 2021. “Modeling Geogenic and Atmospheric Nitrogen through the East River Watershed, Colorado Rocky Mountains”. PLOS ONE 16 (3). doi:10.1371/journal.pone.0247907.
Lake Morphometry and River Network Controls on Evasion of Terrestrially Sourced Headwater CO2
Brinkerhoff, CB, PA Raymond, Taylor Maavara, Y Ishitsuka, KS Aho, and CJ Gleason. (2026) 2021. “Lake Morphometry and River Network Controls on Evasion of Terrestrially Sourced Headwater CO2”. GEOPHYSICAL RESEARCH LETTERS 48 (1). doi:10.1029/2020GL090068.
THIRTY YEARS OF LAND COVER AND FRACTION COVER CHANGES OVER THE SUDANO-SAHEL USING LANDSAT TIME SERIES
Souverijn, N, M Buchhorn, S Horion, R Fensholt, H Verbeeck, J Verbesselt, M Herold, et al. 2021. “THIRTY YEARS OF LAND COVER AND FRACTION COVER CHANGES OVER THE SUDANO-SAHEL USING LANDSAT TIME SERIES”. In 2021 IEEE INTERNATIONAL GEOSCIENCE AND REMOTE SENSING SYMPOSIUM IGARSS, 6170-6173,. doi:10.1109/IGARSS47720.2021.9554349.
A TRANSDISCIPLINARY URBAN ECOLOGY APPROACH TO COMPLEX URBAN SYSTEMS
Cook, Elizabeth M., and Timon McPhearson. 2021. A TRANSDISCIPLINARY URBAN ECOLOGY APPROACH TO COMPLEX URBAN SYSTEMS. ROUTLEDGE HANDBOOK OF URBAN ECOLOGY, 2 EDITION. Routledge.
Water and nitrogen shape winter annual plant diversity and community composition in near-urban Sonoran Desert preserves
Wheeler, MM, SL Collins, NB Grimm, Elizabeth M. Cook, C Clark, RA Sponseller, and SJ Hall. (2026) 2021. “Water and Nitrogen Shape Winter Annual Plant Diversity and Community Composition in Near-Urban Sonoran Desert Preserves”. ECOLOGICAL MONOGRAPHS 91 (3). doi:10.1002/ecm.1450.
Beyond bouncing back? Comparing and contesting urban resilience frames in US and Latin American contexts
Muñoz-Erickson, TA, S Meerow, R Hobbins, Elizabeth M. Cook, DM Iwaniec, M Berbés-Blázquez, NB Grimm, et al. (2026) 2021. “Beyond Bouncing Back? Comparing and Contesting Urban Resilience Frames in US and Latin American Contexts”. LANDSCAPE AND URBAN PLANNING 214. doi:10.1016/j.landurbplan.2021.104173.
Parasite exposure and host susceptibility jointly drive the emergence of epidemics
Merrill, TES, , and CE Cáceres. 2021. “Parasite Exposure and Host Susceptibility Jointly Drive the Emergence of Epidemics”. ECOLOGY 102 (2). doi:10.1002/ecy.3245.
Host Controls of Within-Host Disease Dynamics: Insight from an Invertebrate System
Merrill, TES, Z Rapti, and CE Cáceres. 2021. “Host Controls of Within-Host Disease Dynamics: Insight from an Invertebrate System”. AMERICAN NATURALIST 198 (3): 317-332,. doi:10.1086/715355.
Context-Dependent Host-Symbiont Interactions: Shifts along the Parasitism-Mutualism Continuum
Rogalski, MA, TES Merrill, CD Gowler, CE Cáceres, and MA Duffy. 2021. “Context-Dependent Host-Symbiont Interactions: Shifts Along the Parasitism-Mutualism Continuum”. AMERICAN NATURALIST 198 (5): 563-575,. doi:10.1086/716635.
Effects of plant hydraulic traits on the flammability of live fine canopy fuels
Scarff, FR, T Lenz, AE Richards, Amy Zanne, IJ Wright, and M Westoby. (2021) 2021. “Effects of Plant Hydraulic Traits on the Flammability of Live Fine Canopy Fuels”. FUNCTIONAL ECOLOGY 35: 835-846+. doi:10.1111/1365-2435.13771.
The evolutionary assembly of forest communities along environmental gradients: recent diversification or sorting of pre-adapted clades?
Linan, AG, JA Myers, CE Edwards, Amy Zanne, SA Smith, G Arellano, L Cayola, et al. (2021) 2021. “The Evolutionary Assembly of Forest Communities Along Environmental Gradients: Recent Diversification or Sorting of Pre-Adapted Clades?”. NEW PHYTOLOGIST 232: 2506-2519+. doi:10.1111/nph.17674.
Maternal effects shape the seed mycobiome in Quercus petraea
Fort, T, C Pauvert, Amy Zanne, O Ovaskainen, T Caignard, M Barret, S Compant, A Hampe, S Delzon, and C Vacher. (2021) 2021. “Maternal Effects Shape the Seed Mycobiome in Quercus Petraea”. NEW PHYTOLOGIST 230: 1594-1608+. doi:10.1111/nph.17153.
Assessing the Australian Termite Diversity Anomaly: How Habitat and Rainfall Affect Termite Assemblages
Clement, RA, H Flores-Moreno, LA Cernusak, AW Cheesman, AR Yatsko, SD Allison, P Eggleton, and Amy Zanne. (2021) 2021. “Assessing the Australian Termite Diversity Anomaly: How Habitat and Rainfall Affect Termite Assemblages”. FRONTIERS IN ECOLOGY AND EVOLUTION 9. doi:10.3389/fevo.2021.657444.
Extraction and Purification of DNA from Wood at Various Stages of Decay for Metabarcoding of Wood-Associated Fungi
, M Blyton, B Oberle, GL Powell, J Rigg, D Young, and Amy Zanne. (2021) 2021. Extraction and Purification of DNA from Wood at Various Stages of Decay for Metabarcoding of Wood-Associated Fungi. PLANT MICROBIOME. Vol. 2232. 999 RIVERVIEW DR, STE 208, TOTOWA, NJ 07512-1165 USA: HUMANA PRESS INC. doi:10.1007/978-1-0716-1040-4_10.